SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_169300325
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Placenta
Biosample name: CT27 EVT_D8, ChIP-seq, rep1
Genomic region: chr1:116626528-116683565
Size: 57037
Super-enhancer rank 325
Number of SE elements: 13
ChIP density(Case|Control): 75174.766|7272.2175
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IGSF3 ;
ROSE Overlap IGSF3 ; MIR320B1 ;
ROSE Proximal C1orf137 ;
ROSE Closest IGSF3 ;
Lasso ;
PreSTIGE ;
ABC MAB21L3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_169300325 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers