SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_169300261
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Placenta
Biosample name: CT27 EVT_D8, ChIP-seq, rep1
Genomic region: chr3:45528964-45582612
Size: 53648
Super-enhancer rank 261
Number of SE elements: 12
ChIP density(Case|Control): 80718.7808|5493.5552
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LIMD1 ;
ROSE Overlap LARS2 ;
ROSE Proximal LARS2-AS1 ; LIMD1 ;
ROSE Closest LIMD1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_169300261 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers