SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_169300258
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Placenta
Biosample name: CT27 EVT_D8, ChIP-seq, rep1
Genomic region: chr11:62466711-62509917
Size: 43206
Super-enhancer rank 258
Number of SE elements: 17
ChIP density(Case|Control): 79857.6498|4545.2712
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AHNAK ;
ROSE Overlap AHNAK ;
ROSE Proximal SCGB1A1 ;
ROSE Closest AHNAK ;
Lasso ;
PreSTIGE ;
ABC HNRNPUL2 ; TTC9C ; ZBTB3 ; HNRNPUL2-BSCL2 ; GNG3 ; BSCL2 ; LBHD1 ; UQCC3 ; METTL12 ; C11orf98 ; INTS5 ; POLR2G ; TAF6L ; GANAB ; B3GAT3 ; EML3 ; LRRN4CL ; ROM1 ; TMEM179B ; MTA2 ; UBXN1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_169300258 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers