SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_169300178
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Placenta
Biosample name: CT27 EVT_D8, ChIP-seq, rep1
Genomic region: chr9:35721453-35733450
Size: 11997
Super-enhancer rank 178
Number of SE elements: 1
ChIP density(Case|Control): 93812.9409|1470.8322
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CREB3 ;
ROSE Overlap TLN1 ; MIR6853 ; CREB3 ;
ROSE Proximal MIR6852 ; TPM2 ; RGP1 ; GBA2 ; CA9 ; MSMP ;
ROSE Closest CREB3 ;
Lasso ;
PreSTIGE ;
ABC CREB3 ; TLN1 ; RGP1 ; GBA2 ; TPM2 ; ARHGEF39 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_169300178 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers