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Super-enhancer overview

SE ID: SE_02_166900683
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27, EVT differentiation for 3 days EVT_d3
Genomic region: chr9:136988902-137000895
Size: 11993
Super-enhancer rank 683
Number of SE elements: 5
ChIP density(Case|Control): 21161.6485|2971.8654
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLIC3 ;
ROSE Overlap C9orf142 ; CLIC3 ;
ROSE Proximal LCNL1 ; ABCA2 ; FBXW5 ; C9orf139 ; FUT7 ; NPDC1 ; LCN12 ; C8G ; PTGDS ;
ROSE Closest CLIC3 ;
Lasso ;
PreSTIGE ;
ABC WDR5 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_166900683 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers