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Super-enhancer overview

SE ID: SE_02_166900446
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27, EVT differentiation for 3 days EVT_d3
Genomic region: chr19:3552051-3566013
Size: 13962
Super-enhancer rank 446
Number of SE elements: 9
ChIP density(Case|Control): 26319.7662|2658.3648
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MFSD12 ;
ROSE Overlap MFSD12 ;
ROSE Proximal HMG20B ; MFSD12 ; TBXA2R ; GIPC3 ; C19orf71 ; FZR1 ; CACTIN-AS1 ;
ROSE Closest MFSD12 ;
Lasso ;
PreSTIGE ;
ABC MFSD12 ; CACTIN ; CACTIN-AS1 ; TBXA2R ; C19orf71 ; HMG20B ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_166900446 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers