SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_166900255
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27, EVT differentiation for 3 days EVT_d3
Genomic region: chr20:17965551-18006117
Size: 40566
Super-enhancer rank 255
Number of SE elements: 12
ChIP density(Case|Control): 37921.0968|5715.7494
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNX5 ;
ROSE Overlap SNX5 ; MGME1 ;
ROSE Proximal MGME1 ; SNORD17 ;
ROSE Closest SNX5 ;
Lasso ;
PreSTIGE ;
ABC RBBP9 ; POLR3F ; DZANK1 ; SEC23B ; SMIM26 ; LINC00493 ; DTD1 ; ZNF133 ; PET117 ; OVOL2 ; SNX5 ; MGME1 ; RRBP1 ; BFSP1 ; KIF16B ; SNRPB2 ; LOC100270804 ; LINC00652 ; SLC24A3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_166900255 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers