SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_166900227
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27, EVT differentiation for 3 days EVT_d3
Genomic region: chr11:64268289-64281525
Size: 13236
Super-enhancer rank 227
Number of SE elements: 11
ChIP density(Case|Control): 36091.9248|2105.8476
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPR137 ;
ROSE Overlap BAD ; PLCB3 ;
ROSE Proximal FKBP2 ; TRMT112 ; PRDX5 ; DNAJC4 ; GPR137 ; TRPT1 ; NUDT22 ; VEGFB ; PPP1R14B ; BAD ; TEX40 ; ESRRA ; KCNK4 ;
ROSE Closest GPR137 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_166900227 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers