SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_166900178
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27, EVT differentiation for 3 days EVT_d3
Genomic region: chr16:28524665-28544970
Size: 20305
Super-enhancer rank 178
Number of SE elements: 11
ChIP density(Case|Control): 41334.8885|3378.752
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NUPR1 ;
ROSE Overlap NUPR1 ;
ROSE Proximal CLN3 ; NUPR1 ; SGF29 ; APOBR ; IL27 ;
ROSE Closest NUPR1 ;
Lasso ;
PreSTIGE ;
ABC IL27 ; APOBR ; CLN3 ; SBK1 ; NUPR1 ; SGF29 ; SULT1A1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_166900178 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers