SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_166900081
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27, EVT differentiation for 3 days EVT_d3
Genomic region: chr4:88609361-88659343
Size: 49982
Super-enhancer rank 81
Number of SE elements: 29
ChIP density(Case|Control): 59958.4072|9136.7096
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HERC3 ;
ROSE Overlap HERC3 ;
ROSE Proximal NAP1L5 ; RNU6-33P ;
ROSE Closest HERC3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_166900081 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers