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Super-enhancer overview

SE ID: SE_02_166900020
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27, EVT differentiation for 3 days EVT_d3
Genomic region: chr4:8525300-8584882
Size: 59582
Super-enhancer rank 20
Number of SE elements: 32
ChIP density(Case|Control): 92590.428|9729.7406
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPR78 ;
ROSE Overlap GPR78 ;
ROSE Proximal CPZ ;
ROSE Closest GPR78 ;
Lasso ;
PreSTIGE ;
ABC CPZ ; TRMT44 ; GPR78 ; ACOX3 ; HTRA3 ; ABLIM2 ; SH3TC1 ; PSAPL1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_166900020 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers