SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_166900004
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta
Biosample name: CT27, EVT differentiation for 3 days EVT_d3
Genomic region: chr11:65470657-65510037
Size: 39380
Super-enhancer rank 4
Number of SE elements: 32
ChIP density(Case|Control): 129969.752|9163.726
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MALAT1 ;
ROSE Overlap MALAT1 ;
ROSE Proximal SCYL1 ; LTBP3 ; NEAT1 ; MIR612 ;
ROSE Closest MALAT1 ;
Lasso ;
PreSTIGE ;
ABC KAT5 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_166900004 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers