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Super-enhancer overview

SE ID: SE_02_166500408
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and Lymphoid
Biosample name: JJN3, untreated
Genomic region: chr19:13149827-13173783
Size: 23956
Super-enhancer rank 408
Number of SE elements: 6
ChIP density(Case|Control): 57336.2904|3861.7072
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IER2 ;
ROSE Overlap IER2 ; STX10 ;
ROSE Proximal LYL1 ; TRMT1 ; NACC1 ;
ROSE Closest IER2 ;
Lasso RAD23A ; JUNB ; CALR ; DNASE2 ; NACC1 ; LYL1 ; TRMT1 ; NFIX ; GADD45GIP1 ; RTBDN ; STX10 ; IER2 ; DAND5 ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_166500408 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers