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Super-enhancer overview

SE ID: SE_02_166500353
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and Lymphoid
Biosample name: JJN3, untreated
Genomic region: chr19:12777790-12796454
Size: 18664
Super-enhancer rank 353
Number of SE elements: 4
ChIP density(Case|Control): 60663.5992|2732.4096
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR5684 ;
ROSE Overlap JUNB ; MIR5684 ;
ROSE Proximal BEST2 ; RTBDN ; ASNA1 ; HOOK2 ; RNASEH2A ; PRDX2 ; C19orf43 ; MAST1 ;
ROSE Closest MIR5684 ;
Lasso RAD23A ; WDR83 ; JUNB ; CALR ; DNASE2 ; PRDX2 ; DHPS ; ASNA1 ; GCDH ; C19orf43 ; TNPO2 ; RNASEH2A ; MAST1 ; HOOK2 ; BEST2 ; ZNF490 ; SYCE2 ; NFIX ; FBXW9 ; RTBDN ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_166500353 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers