SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_166500055
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and Lymphoid
Biosample name: JJN3, untreated
Genomic region: chr17:2192709-2269209
Size: 76500
Super-enhancer rank 55
Number of SE elements: 8
ChIP density(Case|Control): 148073.4|12530.7
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC101927839 ;
ROSE Overlap LOC101927839 ; SMG6 ;
ROSE Proximal SRR ;
ROSE Closest LOC101927839 ;
Lasso SMG6 ; SGSM2 ; RPA1 ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_166500055 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers