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Super-enhancer overview

SE ID: SE_02_166500043
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and Lymphoid
Biosample name: JJN3, untreated
Genomic region: chr17:39753061-39822811
Size: 69750
Super-enhancer rank 43
Number of SE elements: 10
ChIP density(Case|Control): 158681.25|9513.9
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IKZF3 ;
ROSE Overlap IKZF3 ;
ROSE Proximal GRB7 ; MIR4728 ; MIEN1 ; ZPBP2 ; IKZF3 ;
ROSE Closest IKZF3 ;
Lasso PNMT ; CDK12 ; GSDMB ; MIEN1 ; STARD3 ; IKZF3 ; PGAP3 ; GRB7 ; LRRC3C ; ZPBP2 ; ERBB2 ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_166500043 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers