SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164900749
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_RAD21_Nut1h_BR2 Nutlin3a 1h
Genomic region: chr19:4556188-4584943
Size: 28755
Super-enhancer rank 749
Number of SE elements: 7
ChIP density(Case|Control): 33637.599|2901.3795
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SEMA6B ;
ROSE Overlap SEMA6B ;
ROSE Proximal PLIN4 ; PLIN5 ; LRG1 ;
ROSE Closest SEMA6B ;
Lasso ;
PreSTIGE ;
ABC SEMA6B ; LRG1 ; PLIN5 ; TNFAIP8L1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164900749 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers