SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164900602
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_RAD21_Nut1h_BR2 Nutlin3a 1h
Genomic region: chr19:4859394-4872826
Size: 13432
Super-enhancer rank 602
Number of SE elements: 4
ChIP density(Case|Control): 35502.1192|1370.064
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLIN3 ;
ROSE Overlap PLIN3 ;
ROSE Proximal ARRDC5 ; TICAM1 ; UHRF1 ;
ROSE Closest PLIN3 ;
Lasso ;
PreSTIGE ;
ABC PLIN3 ; TICAM1 ; UHRF1 ; KDM4B ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164900602 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers