SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164900520
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_RAD21_Nut1h_BR2 Nutlin3a 1h
Genomic region: chr19:36127164-36142554
Size: 15390
Super-enhancer rank 520
Number of SE elements: 3
ChIP density(Case|Control): 38119.491|1475.901
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CAPNS1 ;
ROSE Overlap CAPNS1 ;
ROSE Proximal OVOL3 ; TBCB ; CAPNS1 ; POLR2I ; COX7A1 ;
ROSE Closest CAPNS1 ;
Lasso ;
PreSTIGE ;
ABC HAUS5 ; RBM42 ; ETV2 ; COX6B1 ; UPK1A-AS1 ; TMEM147-AS1 ; TMEM147 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164900520 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers