SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164900466
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_RAD21_Nut1h_BR2 Nutlin3a 1h
Genomic region: chr16:641364-661539
Size: 20175
Super-enhancer rank 466
Number of SE elements: 3
ChIP density(Case|Control): 39083.01|932.085
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WDR90 ;
ROSE Overlap FAM195A ; WDR90 ;
ROSE Proximal RHBDL1 ; RHOT2 ; WFIKKN1 ; STUB1 ; FBXL16 ; JMJD8 ; WDR24 ; C16orf13 ;
ROSE Closest WDR90 ;
Lasso ;
PreSTIGE ;
ABC RAB40C ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164900466 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers