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Super-enhancer overview

SE ID: SE_02_164800479
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_RAD21_Nut1h_BR1 Nutlin3a 1h
Genomic region: chr3:48683196-48717859
Size: 34663
Super-enhancer rank 479
Number of SE elements: 8
ChIP density(Case|Control): 35335.4622|4048.6384
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NCKIPSD ;
ROSE Overlap IP6K2 ; NCKIPSD ;
ROSE Proximal MIR6824 ; CELSR3 ; SLC26A6 ; CELSR3-AS1 ; MIR4793 ; IP6K2 ;
ROSE Closest NCKIPSD ;
Lasso ;
PreSTIGE ;
ABC CELSR3 ; CELSR3-AS1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164800479 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers