SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164800387
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_RAD21_Nut1h_BR1 Nutlin3a 1h
Genomic region: chr19:41859111-41873078
Size: 13967
Super-enhancer rank 387
Number of SE elements: 3
ChIP density(Case|Control): 36209.4475|1477.7086
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR6797 ;
ROSE Overlap MIR6797 ; RPS19 ;
ROSE Proximal LYPD4 ; ARHGEF1 ; DMRTC2 ; CD79A ;
ROSE Closest MIR6797 ;
Lasso ;
PreSTIGE ;
ABC B9D2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164800387 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers