SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164800340
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_RAD21_Nut1h_BR1 Nutlin3a 1h
Genomic region: chr11:807363-814472
Size: 7109
Super-enhancer rank 340
Number of SE elements: 1
ChIP density(Case|Control): 37567.5105|781.99
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORA52 ;
ROSE Overlap RPLP2 ; SNORA52 ;
ROSE Proximal TSPAN4 ; POLR2L ; PIDD1 ; CRACR2B ; PNPLA2 ; PANO1 ; CD151 ; SLC25A22 ; LOC171391 ; CEND1 ; PDDC1 ;
ROSE Closest SNORA52 ;
Lasso ;
PreSTIGE ;
ABC PNPLA2 ; CRACR2B ; SLC25A22 ; CEND1 ; PANO1 ; PIDD1 ; RPLP2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164800340 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers