SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164700945
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_RAD21_Nut0h_BR2 DMSO
Genomic region: chr16:88644831-88658036
Size: 13205
Super-enhancer rank 945
Number of SE elements: 6
ChIP density(Case|Control): 12300.4575|1861.905
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CYBA ;
ROSE Overlap MVD ; CYBA ;
ROSE Proximal IL17C ; RNF166 ; CTU2 ; SNAI3-AS1 ; SNAI3 ;
ROSE Closest CYBA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164700945 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers