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Super-enhancer overview

SE ID: SE_02_164700325
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_RAD21_Nut0h_BR2 DMSO
Genomic region: chr11:10509886-10542506
Size: 32620
Super-enhancer rank 325
Number of SE elements: 6
ChIP density(Case|Control): 24474.786|4351.508
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF141 ;
ROSE Overlap RNF141 ; MRVI1-AS1 ;
ROSE Proximal LYVE1 ; MIR4485 ; MTRNR2L8 ; AMPD3 ;
ROSE Closest RNF141 ;
Lasso ;
PreSTIGE ;
ABC AMPD3 ; LYVE1 ; MRVI1-AS1 ; RNF141 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164700325 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers