SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164700217
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_RAD21_Nut0h_BR2 DMSO
Genomic region: chr18:3648662-3671664
Size: 23002
Super-enhancer rank 217
Number of SE elements: 5
ChIP density(Case|Control): 27487.39|2838.4468
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DLGAP1-AS2 ;
ROSE Overlap DLGAP1 ;
ROSE Proximal DLGAP1-AS2 ;
ROSE Closest DLGAP1-AS2 ;
Lasso ;
PreSTIGE ;
ABC SMCHD1 ; EMILIN2 ; LPIN2 ; MYL12A ; LOC104968399 ; MYL12B ; TGIF1 ; GAPLINC ; CBX3P2 ; DLGAP1-AS2 ; DLGAP1-AS1 ; METTL4 ; NDC80 ; ZBTB14 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164700217 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers