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Super-enhancer overview

SE ID: SE_02_164700055
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_RAD21_Nut0h_BR2 DMSO
Genomic region: chr19:2028568-2062736
Size: 34168
Super-enhancer rank 55
Number of SE elements: 5
ChIP density(Case|Control): 46355.7256|3437.3008
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MKNK2 ;
ROSE Overlap MKNK2 ;
ROSE Proximal IZUMO4 ; MKNK2 ; MOB3A ; BTBD2 ;
ROSE Closest MKNK2 ;
Lasso ;
PreSTIGE ;
ABC BTBD2 ; IZUMO4 ; MOB3A ; MKNK2 ; CSNK1G2 ; ADAT3 ; SCAMP4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164700055 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers