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Super-enhancer overview

SE ID: SE_02_164700020
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_RAD21_Nut0h_BR2 DMSO
Genomic region: chr1:156096868-156138230
Size: 41362
Super-enhancer rank 20
Number of SE elements: 6
ChIP density(Case|Control): 67051.9382|3921.1176
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LMNA ;
ROSE Overlap LMNA ;
ROSE Proximal LAMTOR2 ; RAB25 ; UBQLN4 ; SEMA4A ; LMNA ; MEX3A ;
ROSE Closest LMNA ;
Lasso ;
PreSTIGE ;
ABC RHBG ; CCT3 ; TSACC ; PMF1 ; GLMP ; TMEM79 ; SMG5 ; PAQR6 ; LAMTOR2 ; RAB25 ; PMF1-BGLAP ; SLC25A44 ; LMNA ; MEX3A ; BGLAP ; UBQLN4 ; SSR2 ; ARHGEF2 ; RXFP4 ; KIAA0907 ; RIT1 ; SYT11 ; GON4L ; MSTO2P ; DAP3 ; YY1AP1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164700020 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers