SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164600615
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_RAD21_Nut0h_BR1 DMSO
Genomic region: chr1:1144606-1166827
Size: 22221
Super-enhancer rank 615
Number of SE elements: 4
ChIP density(Case|Control): 19238.9418|1959.8922
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR200B ;
ROSE Overlap ;
ROSE Proximal TTLL10 ; LINC01342 ; C1orf159 ; TNFRSF18 ; MIR200A ; TNFRSF4 ; MIR429 ; MIR200B ;
ROSE Closest MIR200B ;
Lasso ;
PreSTIGE ;
ABC SDF4 ; B3GALT6 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164600615 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers