SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164600538
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_RAD21_Nut0h_BR1 DMSO
Genomic region: chr10:72319116-72337040
Size: 17924
Super-enhancer rank 538
Number of SE elements: 6
ChIP density(Case|Control): 20782.878|1806.7392
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DNAJB12 ;
ROSE Overlap DNAJB12 ;
ROSE Proximal DNAJB12 ; DDIT4 ;
ROSE Closest DNAJB12 ;
Lasso ;
PreSTIGE ;
ABC PRF1 ; PALD1 ; ADAMTS14 ; TBATA ; SGPL1 ; PCBD1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164600538 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers