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Super-enhancer overview

SE ID: SE_02_164500908
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr3:52253898-52282906
Size: 29008
Super-enhancer rank 908
Number of SE elements: 5
ChIP density(Case|Control): 20703.0096|2903.7008
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIRLET7G ;
ROSE Overlap WDR82 ; MIRLET7G ;
ROSE Proximal PPM1M ; TLR9 ; MIR135A1 ; GLYCTK-AS1 ; GLYCTK ; DNAH1 ; TWF2 ;
ROSE Closest MIRLET7G ;
Lasso ;
PreSTIGE ;
ABC TLR9 ; ALAS1 ; TWF2 ; LOC101929054 ; PPM1M ; WDR82 ; GLYCTK ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500908 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers