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Super-enhancer overview

SE ID: SE_02_164500894
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr1:46338874-46357780
Size: 18906
Super-enhancer rank 894
Number of SE elements: 3
ChIP density(Case|Control): 19979.8608|1987.0206
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NSUN4 ;
ROSE Overlap NSUN4 ;
ROSE Proximal UQCRH ; NSUN4 ; FAAH ; LRRC41 ;
ROSE Closest NSUN4 ;
Lasso ;
PreSTIGE ;
ABC POMGNT1 ; LOC101929626 ; PIK3R3 ; MAST2 ; IPP ; TMEM69 ; GPBP1L1 ; CCDC17 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500894 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers