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Super-enhancer overview

SE ID: SE_02_164500890
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr19:12717428-12735497
Size: 18069
Super-enhancer rank 890
Number of SE elements: 5
ChIP density(Case|Control): 19702.4376|1674.9963
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNPO2 ;
ROSE Overlap TNPO2 ; C19orf43 ;
ROSE Proximal BEST2 ; FBXW9 ; ASNA1 ; WDR83OS ; HOOK2 ; WDR83 ; SNORD41 ; DHPS ;
ROSE Closest TNPO2 ;
Lasso ;
PreSTIGE ;
ABC ZNF490 ; ZNF791 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500890 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers