SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164500841
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr11:62830401-62834254
Size: 3853
Super-enhancer rank 841
Number of SE elements: 1
ChIP density(Case|Control): 19054.6262|382.2176
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: STX5 ;
ROSE Overlap WDR74 ; STX5 ;
ROSE Proximal SNORD29 ; SNHG1 ; RNU2-2P ; SLC3A2 ; MIR6514 ; NXF1 ; MIR6748 ; SNORD26 ; SNORD31 ; SNORD27 ; SNORD30 ; TMEM179B ; SNORD22 ; SNORD28 ; TMEM223 ; SNORD25 ;
ROSE Closest STX5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500841 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers