SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164500740
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr9:128682809-128698574
Size: 15765
Super-enhancer rank 740
Number of SE elements: 4
ChIP density(Case|Control): 21886.5495|1625.3715
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SET ;
ROSE Overlap SET ;
ROSE Proximal ZDHHC12 ; WDR34 ; PKN3 ; LOC100506100 ;
ROSE Closest SET ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500740 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers