SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164500713
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr16:2002963-2011253
Size: 8290
Super-enhancer rank 713
Number of SE elements: 1
ChIP density(Case|Control): 21363.33|659.884
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF598 ;
ROSE Overlap ZNF598 ;
ROSE Proximal SNORA10 ; SLC9A3R2 ; SNHG9 ; GFER ; RPL3L ; SNORA64 ; SYNGR3 ; TSC2 ; RNF151 ; NTHL1 ; NPW ; NDUFB10 ; RPS2 ; NOXO1 ; SNORA78 ; TBL3 ;
ROSE Closest ZNF598 ;
Lasso ;
PreSTIGE ;
ABC ZNF598 ; SYNGR3 ; GFER ; NOXO1 ; TBL3 ; RNF151 ; SNHG9 ; RPS2 ; NDUFB10 ; MSRB1 ; LINC00254 ; MEIOB ; FAHD1 ; HAGH ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500713 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers