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Super-enhancer overview

SE ID: SE_02_164500699
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr12:89346743-89355121
Size: 8378
Super-enhancer rank 699
Number of SE elements: 3
ChIP density(Case|Control): 21926.0638|922.4178
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DUSP6 ;
ROSE Overlap DUSP6 ;
ROSE Proximal DUSP6 ;
ROSE Closest DUSP6 ;
Lasso ;
PreSTIGE ;
ABC TMTC3 ; CEP290 ; C12orf29 ; KITLG ; LOC728084 ; GALNT4 ; POC1B ; POC1B-GALNT4 ; LOC105369891 ; ATP2B1-AS1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500699 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers