SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164500670
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr20:35658470-35665745
Size: 7275
Super-enhancer rank 670
Number of SE elements: 3
ChIP density(Case|Control): 22229.49|800.25
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CPNE1 ;
ROSE Overlap RBM12 ; CPNE1 ;
ROSE Proximal NFS1 ; CPNE1 ; ROMO1 ; SPAG4 ;
ROSE Closest CPNE1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500670 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers