SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164500650
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr11:65568926-65578092
Size: 9166
Super-enhancer rank 650
Number of SE elements: 1
ChIP density(Case|Control): 22686.7666|769.0274
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FAM89B ;
ROSE Overlap SSSCA1-AS1 ; SSSCA1 ; FAM89B ; EHBP1L1 ;
ROSE Proximal SCYL1 ; PCNXL3 ; LTBP3 ; MAP3K11 ; SSSCA1 ; KCNK7 ;
ROSE Closest FAM89B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500650 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers