SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164500582
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr6:4017309-4054476
Size: 37167
Super-enhancer rank 582
Number of SE elements: 6
ChIP density(Case|Control): 27395.7957|4047.4863
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRPF4B ;
ROSE Overlap PRPF4B ;
ROSE Proximal C6orf201 ; FAM217A ;
ROSE Closest PRPF4B ;
Lasso ;
PreSTIGE ;
ABC PRPF4B ; SLC22A23 ; PXDC1 ; FAM50B ; LOC100507506 ; ECI2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500582 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers