SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164500559
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr18:3246203-3251705
Size: 5502
Super-enhancer rank 559
Number of SE elements: 1
ChIP density(Case|Control): 24604.3938|804.3924
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MYL12A ;
ROSE Overlap MYL12A ;
ROSE Proximal MYL12B ; MYL12A ; LOC104968399 ; MYOM1 ;
ROSE Closest MYL12A ;
Lasso ;
PreSTIGE ;
ABC MYL12A ; LOC104968399 ; MYL12B ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500559 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers