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Super-enhancer overview

SE ID: SE_02_164500554
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr9:131393015-131466456
Size: 73441
Super-enhancer rank 554
Number of SE elements: 15
ChIP density(Case|Control): 29743.605|5845.9036
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRRC2B ;
ROSE Overlap PRRC2B ;
ROSE Proximal SNORD62A ; POMT1 ;
ROSE Closest PRRC2B ;
Lasso ;
PreSTIGE ;
ABC ZDHHC12 ; PKN3 ; SET ; WDR34 ; SPTAN1 ; GLE1 ; ODF2 ; ENDOG ; TBC1D13 ; ZER1 ; LOC100506100 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500554 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers