SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164500542
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr11:807514-812774
Size: 5260
Super-enhancer rank 542
Number of SE elements: 1
ChIP density(Case|Control): 24646.782|462.88
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPLP2 ;
ROSE Overlap RPLP2 ; SNORA52 ;
ROSE Proximal TSPAN4 ; POLR2L ; PIDD1 ; CRACR2B ; PNPLA2 ; PANO1 ; CD151 ; SLC25A22 ; LOC171391 ; CEND1 ; PDDC1 ;
ROSE Closest RPLP2 ;
Lasso ;
PreSTIGE ;
ABC PNPLA2 ; CRACR2B ; SLC25A22 ; CEND1 ; PANO1 ; PIDD1 ; RPLP2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500542 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers