SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164500407
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr16:2512903-2521769
Size: 8866
Super-enhancer rank 407
Number of SE elements: 1
ChIP density(Case|Control): 28483.7982|680.0222
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AMDHD2 ;
ROSE Overlap ATP6V0C ; AMDHD2 ;
ROSE Proximal CEMP1 ; MIR3178 ; TBC1D24 ; NTN3 ; PDPK1 ; MIR6768 ;
ROSE Closest AMDHD2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500407 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers