SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164500398
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr6:41916871-41939440
Size: 22569
Super-enhancer rank 398
Number of SE elements: 5
ChIP density(Case|Control): 30050.6235|1882.2546
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BYSL ;
ROSE Overlap BYSL ; CCND3 ; MED20 ;
ROSE Proximal USP49 ; MED20 ;
ROSE Closest BYSL ;
Lasso ;
PreSTIGE ;
ABC MED20 ; BYSL ; CCND3 ; TAF8 ; USP49 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500398 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers