SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164500396
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr22:39511940-39535203
Size: 23263
Super-enhancer rank 396
Number of SE elements: 6
ChIP density(Case|Control): 30658.3077|2368.1734
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ATF4 ;
ROSE Overlap MIEF1 ; ATF4 ; RPS19BP1 ;
ROSE Proximal CACNA1I ; MIEF1 ; MGAT3-AS1 ; MGAT3 ; RPS19BP1 ;
ROSE Closest ATF4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500396 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers