SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164500292
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr11:66615683-66664801
Size: 49118
Super-enhancer rank 292
Number of SE elements: 10
ChIP density(Case|Control): 37511.4166|4847.9466
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RBM4 ;
ROSE Overlap RBM4 ; RBM14 ; RBM14-RBM4 ;
ROSE Proximal CTSF ; RBM4B ; CCS ; RBM14-RBM4 ; CCDC87 ;
ROSE Closest RBM4 ;
Lasso ;
PreSTIGE ;
ABC LRFN4 ; PC ; C11orf86 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500292 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers