SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164500287
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr18:3446244-3456928
Size: 10684
Super-enhancer rank 287
Number of SE elements: 2
ChIP density(Case|Control): 34154.6112|1095.11
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TGIF1 ;
ROSE Overlap TGIF1 ;
ROSE Proximal TGIF1 ; GAPLINC ;
ROSE Closest TGIF1 ;
Lasso ;
PreSTIGE ;
ABC TGIF1 ; MYL12A ; LPIN2 ; EMILIN2 ; MYL12B ; LOC104968399 ; DLGAP1-AS1 ; GAPLINC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500287 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers