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Super-enhancer overview

SE ID: SE_02_164500224
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr16:30063434-30079079
Size: 15645
Super-enhancer rank 224
Number of SE elements: 3
ChIP density(Case|Control): 38968.566|1684.9665
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP4C ;
ROSE Overlap PPP4C ; ALDOA ;
ROSE Proximal ALDOA ; C16orf92 ; FAM57B ; YPEL3 ; DOC2A ; TBX6 ; MAPK3 ; GDPD3 ;
ROSE Closest PPP4C ;
Lasso ;
PreSTIGE ;
ABC PPP4C ; TBX6 ; YPEL3 ; LOC101928595 ; ALDOA ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500224 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers