SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164500183
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut10h_BR2 Nutlin3a 10h
Genomic region: chr16:89984009-90023730
Size: 39721
Super-enhancer rank 183
Number of SE elements: 9
ChIP density(Case|Control): 46771.4775|5008.8181
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DBNDD1 ;
ROSE Overlap DBNDD1 ; AFG3L1P ; GAS8 ;
ROSE Proximal CENPBD1 ; AFG3L1P ; DBNDD1 ; GAS8 ; URAHP ; DEF8 ; GAS8-AS1 ;
ROSE Closest DBNDD1 ;
Lasso ;
PreSTIGE ;
ABC TUBB3 ; MC1R ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164500183 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers